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GUIDES & DOCUMENTATION

  1. Clarity registration message This dialog allows you to register your Clarity station online at the DataApex. Registration is voluntary and it automatically allows you to download updates from the…
  2. Use menu item Chromatogram - Peak - Peak Groups… to invoke Groups dialog. Select an existing group from the list and click Delete. Click in the chromatogram to select the start and again to…
  3. With the introduction of the WAVE integration algorithm, there are now 2 ways to remove the peak from the integration. First one is present also in a Legacy Integration algorithm, the second is…
  4. Report error after Clarity crashed Send Report dialog If Clarity encounters a serious problem and crashes, it will invoke a dialog during the crash that offers to report the problem to DataApex.…
  5. Report Header Tabs: Page Setup - Lab. Header - Report Header - Method - Calibration - Chromatogram - Results - Sequence - SST - MS - Audit & Signatures - PDA - NGA - DHA - Lab. Footer Selects…
  6. Tabs: Page Setup - Lab. Header - Report Header - Method - Calibration - Chromatogram - Results - Sequence - SST - Audit & Signatures - PDA - NGA - DHA - Lab. Footer This dialog serves for…
  7. Report Setup While in the GPC mode, the Report Setup command still opens the Report Setup dialog, though with some changes on particular tabs. The Report Header, Method, Chromatogram, Calibration…
  8. Report Setup Tabs: Page Setup - Lab. Header - Report Header - Method - Calibration - Chromatogram - Results - Sequence - SST - MS - Audit & Signatures - PDA - NGA - DHA - Lab. Footer The Report…
  9. Report Setup - Calibration Report Setup - Calibration (GPC) Calibration Curve Prints the calibration curve displayed in the Calibration window. Fixed Height If the Fixed Height checkbox is…
  10. Report Setup - Chromatogram Report Setup - Chromatogram (GPC) The printing of Chromatogram, MW Distribution or Cumulative MW Distribution can be individually selected by the appropriate…
  11. Report Setup (DHA) Tabs: Page Setup - Lab. Header - Report Header - Method - Calibration - Chromatogram - Results - Sequence - SST - MS - Audit & Signatures - PDA - NGA - DHA - Lab. Footer In…
  12. Report Setup - GCxGC Tabs: Page Setup - Lab. Header - Report Header - Method - Calibration - Chromatogram - Results - Sequence - SST - GCxGC - Audit & Signatures - PDA - NGA - DHA- Lab. Footer…
  13. Report Setup - Method (GPC) The added GPC Integration Table and GPC Calculation Parameters checkboxes enable the display of corresponding GPC Integration and GPC Calculation tabs in the Method Setup…
  14. Report Setup - MS Tabs: Page Setup - Lab. Header - Report Header - Method - Calibration - Chromatogram - Results - Sequence - SST - MS - Audit & Signatures - PDA - NGA - DHA - Lab. Footer…
  15. Report Setup - MS Tabs: Page Setup - Lab. Header - Report Header - Method - Calibration - Chromatogram - Results - Sequence - SST - MS - Audit & Signatures - PDA - NGA - DHA - Lab. Footer…
  16. Report Setup (NGA) Tabs: Page Setup - Lab. Header - Report Header - Method - Calibration - Chromatogram - Results - Sequence - SST - MS - Audit & Signatures - PDA - NGA - DHA - Lab. Footer In…
  17. Report Setup - Report Header (GPC) GPC Parameters GPC Parameters checkbox adds the detailed info about GPC parameters to the printed report. This info comes from the chromatogram header and is…
  18. Report Setup - Results Report Setup - GPC Results The printing of Result Table, Slice Table, Ranges Table or Summary Table can be individually selected by the appropriate checkboxes. The Slice…
  19. Report Setup - SST Tabs: Page Setup - Lab. Header - Report Header - Method - Calibration - Chromatogram - Results - Sequence - SST - MS - Audit & Signatures - PDA - NGA - DHA - Lab. Footer The…
  20. Reprocessing by method is suitable for applying Integration parameters to previously measured chromatograms after these parameters were saved to the method by Save chromatogram method as method file…
  21. Reprocessing - Dual Chromatogram Mode  Reprocessing by method is possible in the standard manner using the Batch dialog or directly in the Chromatogram window using the Method menu. Integration…
  22. If there were some problems encountered during the sequence acquisition, the whole sequence or selected chromatograms can be reprocessed to correct those problems. Commonly encountered problems are…
  23. Reprocessing whole sequence can be convenient if performing reintegration, recalibration, or changing types of samples is needed. It can also be used with calibration cloning, more in the topic…
  24. If you are using any kind of the calibration cloning in the sequence the reprocessing whole sequence is similar to regular reprocessing described in the previous topic. Please refer to the…
  25. Respect Clarity’s file structure Maintaining Clarity’s file structure is crucial for ensuring smooth operation and reliable data acquisition. The Clarity folder includes four subfolders: Bin Folder…
  26. Restore Restores or deletes files and projects in the Clarity station. This command invokes the Backup - Restore Archive dialog. The Restore command restores files from any directory to the current…
  27. Open the Backup dialog by choosing Instrument - Restore... on the Instrument window. Choose the source directory and select the source file ⓒ. Select the File Type ⓐ option according to the files…
  28. Open the Backup dialog by selecting Instrument - Restore... in the Instrument window. Choose the source directory and select the source file ⓒ. Compressed files will have the .DGZ extension. Select…
  29. In Clarity, it is possible to: Restrict user's access to instruments Restrict user's access to Clarity procedures Open the User Accounts dialog: click on or choose System - User Accounts. Check…
  30. Result Table Invoking this command switches the lower part of the Chromatogram window to the Results tab, displaying the Result Table in the left half and the Common for All Signals section in the…
  31. Result Table Result Table in the MS Extension contains several columns that are not present in standard Clarity. These columns are described below the picture. Also, some columns from standard…
  32. Result Table Result Table in the MS-MS Extension contains several columns that are not present in standard Clarity. These columns are described below the picture. Also, some columns from standard…
  33. Result Table Error Messages When it is not possible to use the selected type of Calculation for whatever reason, a red error message in the Result Table header (with exclamation marks) indicates the…
  34. Results This section contains commands for displaying the result tables. Result Table Switches to the Result Table on the Results tab of the Chromatogram window. All Signals Result Table…
  35. Results Tabs: Page Setup - Lab. Header - Report Header - Method - Calibration - Chromatogram - Results - Sequence - SST - MS - Audit & Signatures - PDA - NGA - DHA - Lab. Footer Determines the…
  36. Results The Result Table of a PDA chromatogram is expanded by the following columns: PDA Peak Purity, PDA Name Match, PDA Best Match Name, and PDA Best Match. It is possible to change the order of…
  37. Advanced topics describing how to use User Columns to calculate custom results, etc.
  38. The following chapters contain information about how to work with results, calculations, mathematical operations and data reports.
  39. For results presentation it is advantageous to: Set the Overlay Mode by the File - Overlay Mode command or icon ① in the Chromatogram window. Open all desired chromatograms using the File - Open…
  40. Dialog to Resume or Reset Sequence In case the user wants to run a sequence which contains already measured lines, it is necessary to Resume the sequence to continue measuring first unfinished…
  41. Right section of System Configuration dialog Sets the number of displayed Instruments and allocates equipment to the relevant Instruments. System Configuration - right section Allocate the…
  42. Open the Single Analysis dialog by selecting Analysis - Single or by clicking the icon in the Instrument window. Fill in the sample information in the Sample ID and/or Sample fields ⓐ. Fill in the…
  43. Running the Sequence measurement This chapter and the prepared Demo1 project will guide you through Sequence window used for automated measurement. Sequence operation allows automated measurement of…
  44. Running the Single Analysis Analysis Procedure: Step 1 -> Step 2 -> Step 3 -> Step 4 There is a simple project DEMO2 aimed on basic functions. It shows the way to start a Single Analysis,…
  45. Used to save the active chromatogram under a chosen name and/or to another directory (Ctrl + Shift + S). Saving always means that a copy of the active chromatogram is created.…
  46. Save As Calibration The dialog is opened by the File - Save As... command or the Ctrl + Shift + S shortcut in the Calibration window. It saves the opened calibration file under a…
  47. Save As Dialog (Sequence, Chromatogram, Calibration, Method) This is a universal dialog for saving files where the new name can be entered or a new directory selected. As it differs somewhat in…
  48. Each chromatogram contains saved copy of the method used for acquisition of such chromatogram. However, changes done in Chromatogram window (e.g. Description, Integration Parameters, linked…
  49. To search for a matching compound in a PDA library, follow this procedure: Move the marker ① to the peak for which you want to find a matching spectrum in a library. Right-mouse click to a pane…
  50. If more than one board is installed the Select Control dialog containing a list of all boards opens first. Select Control Note: If a converter has not been installed or is not functional, the…