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GUIDES & DOCUMENTATION

  1. User Guide
    This guide contains large source of how-to articles which will help you with daily task you are facing in Clarity. Try to search for a procedure you want to perform in Clarity or browse the topics…
  2. User Options…
    Tabs: General - Graph - Axes Appearance - Signals & Curves - Gradient & Auxiliary Signals - Directories Sets Instrument window properties. When prompted, the User Options dialog will be…
  3. User Variables
    This topic describes how to set up User Variables. User Variables let you define custom numeric values that can be reused in User Columns formulas, making calculations more flexible. Analysis User…
  4. Using a reference peak to improve compound identification
    A reference peak is a peak used as a reference for recalculating the retention times for the rest of the peaks in a chromatogram. This method allows a better compound identification in those cases…
  5. Using an Offline Instrument for Data Evaluation
    Clarity allows you to use a non-purchased Instrument (Offline Instrument) for data evaluation while a measurement is running on another Instrument. The Offline Instrument cannot be used for data…
  6. Using Automatic Compound Search
    When you run an Automatic Compound Search, the Automatic Compound Search tab of the MS Search dialog opens. In Use Signal ①, choose the signal on which peaks will be detected and matched with…
  7. Using Automatic Compound Search
    When you run an Automatic Compound Search, the Automatic Compound Search tab of the MS Search dialog opens. In Use Signal ①, choose the signal on which peaks will be detected and matched with…
  8. Using Calculate By to determine the amount of a compound with no standard available
    When no standard of a compound is available and a compound with known response ratio to the unavailable one is present within the sample (this information can be found in respective norm etc.) the…
  9. Using Internal Standard (ISTD) from different signal in calibration
    In analytical workflows involving multiple detectors or multi-signal setups, it is sometimes necessary to measure the internal standard (ISTD) on a different signal than the analytes. This is…
  10. Using Internal Standard (ISTD) in calibration
    The use of internal standard (ISTD) helps to compensate for non-reproducible injected volume or for analyte losses during sample preparation. A known amount of internal standard compound (which…
  11. Using Single Compound Search
    When you run a Single Compound Search, the Single Compound Search tab of the MS Search dialog opens. In Search in Ret. Time ①, you can specify a single retention time or a retention time range…
  12. Using Single Compound Search
    When you run a Single Compound Search, the Single Compound Search tab of the MS Search dialog opens. In Search in Ret. Time ①, you can specify a single retention time or a retention time range…
  13. Using Target Compound Search
    Target Compound Search is a two-step process serving for finding the presence or position of given compound (for which the user knows the spectrum) in the chromatogram. When you run an Target…
  14. Using Target Compound Search
    Target Compound Search is a two-step process serving for finding the presence or position of given compound (for which the user knows the spectrum) in the chromatogram. When you run an Target…
  15. Utilities
    Clarity installation contains various utilities for validating the installation or predefining various Clarity profiles which helps you in using more configurations of laboratory instruments.
  16. Validating multi-detector chromatograms
    Validating multi-detector chromatograms When using multi-detector chromatograms, it is possible to select which signal will be used for SST evaluation. Chromatogram - SST Results - Multi-detector…
  17. Validation of the chromatographic system
    When validating a chromatographic system, the mean values or standard deviations of monitored parameters are checked for the compliance with specified criteria. Chromatographic system parameters…
  18. Validation results hierarchy
    Validation results hierarchy Validation results are created hierarchically, their importance is arranged in ascending order in the sequence: parameter -> component -> overall evaluation. Note…
  19. Verify
    Verify Opens Verify Signatures dialog that displays a list of the active chromatogram’s electronic signatures. The list contains all existing signatures for all existing versions of given…
  20. Version Compatibility Across Clarity Stations
    To ensure proper functionality of all Clarity stations, it is essential that the same version of the Clarity software is installed on every PC. If the PC used for instrument control is running a…
  21. View
    View This is a submenu for setting up the appearance of the main Clarity window. Similar ones can be found in all major Clarity windows. Note: If the main Clarity window covers any of the dialogs,…
  22. View
    This section contains commands used to set up the appearance of the Chromatogram window. Command Description Toolbars Displays commands for toolbars. The command is similar to the…
  23. View
    Toolbars Displays commands for toolbars. The command is similar to the Toolbars command in the main Clarity window.Analysis, Signals, Zoom, Axis Range: Hides/shows the respective toolbar.Customize…
  24. View
    View Commands for setting up the Sequence window. Toolbars Displays/hides all toolbars. The command is similar to the Toolbars command in the main Clarity window.File, Edit, Sequence: Hides/…
  25. View
    Displays the setting for the Audit Trail window. Toolbar Displays commands for toolbars. The command is similar to the Toolbars command in the main Clarity window.Default: Hides/shows the…
  26. View
    Submenu of commands for displaying and modifying of the Local Audit Trail window settings. Toolbar Displays commands for toolbars. The command is similar to the Toolbars command in the main…
  27. View
    Commands for setting up the PDA Chromatogram window. Toolbars Displays/hides all toolbars. The command is similar to the Toolbars command in the Clarity main window (for more details see also…
  28. View
    View Fit to Content When selected, the window changes its size according to its content. When not selected, the window can be re-sized according to individual preferences - the size will be…
  29. View
    View This menu contains commands for setting up the appearance of the Calibration window. Command Description Toolbars Displays commands for toolbars. The command is similar to the…
  30. What is a Regulated Environment
    A regulated environment is any environment operating under defined control rules and standards that ensure valid and consistently high-quality results or products. Such regulations are usually set…
  31. Window
    Window The commands for working with windows of given Instrument. Hide All Hides all open windows of the Instrument. Show All Displays all hidden windows. Main Displays the…
  32. Window
    Window This is an entry point to a submenu of commands for displaying other main windows. Main Displays the Clarity main station window. Instrument Displays the Instrument window.…
  33. Window
    This is an entry point to a submenu of commands for displaying other main windows. Main Displays the Clarity main window. Instrument Displays the Instrument window. Chromatogram…
  34. Window
    Window This section contains commands allowing to open other base windows. Main Displays the Clarity main station window. Instrument Displays the Instrument window. Chromatogram…
  35. Window
    A submenu of commands for working with the station windows. Main Displays the main Clarity window of the station. Instrument 1 ... 4 Displays the relevant Instrument window.
  36. Window
    Window This section contains commands allowing to open other base windows. Main Displays the Clarity main station window. Instrument Displays the Instrument window. All Instruments…
  37. Window
    Main Displays the main Clarity window. Instrument Displays the Instrumentwindow.  
  38. Window
    Window This menu contains commands for displaying other main windows: Command Description Main Displays the Clarity main station window. Instrument Displays the Instrument window…
  39. Working with individual signals of a multisignal chromatogram smoothly
    Working with individual signals of a multisignal chromatogram smoothly There are some tips on how you can enhance your workflow so that working with multiple signals is more convenient. Individual…
  40. Working with non-MS Signals (e.g. PDA) on MS Instrument
    This chapter describes the workflow for compound identification, and possible quantification of compounds on non-MS signals using an MS instrument. Although the signal is not acquired by MS detector…

CLARITY RELEASE NOTES

  1. 10.0.0 (Version history)
    *New: Control: First Release - Agilent 8850 control module is now available. *New: Control: First Release - Coruitech modules (Corui Module samplerC, Corui Module BSM, Corui Module QSM, Corui Module CHManager, Corui Module UV Detector, Corui Module PDA detector) are available through external installer. *New: Control: First Release - CXTH control modules...
    *New: Control: First Release - Agilent 8850 control module is now available.*New: Control: First Release - Coruitech modules (Corui Module samplerC, Corui Module BSM, Corui Module QSM, Corui Module…
  2. 10.0.0 (Version history)
    *New: Chromatogram: A new check preventing creation of empty chromatogram file name due to propagating empty variables %q or %Q. *New: Method: Improved memory handling when working with large amount of chromatograms with the same instrument method. *New: Sequence: Removal of Paste Insert command. #Fixed Bug: Calibration: During calibration cloning, the calibration file...
    *New: Chromatogram: A new check preventing creation of empty chromatogram file name due to propagating empty variables %q or %Q.*New: Method: Improved memory handling when working with large amount…
  3. 10.1.0 (Version history)
    *New: Calibration: Blank is now ignored for the construction of the calibration curve when Origin is set to "Curve passes through Origin" or "Compute with Origin". This can result in different calibration curve parameters compared to previous versions. *New: Calibration: Determination Coefficient is now calculated for the calibration curve in addition...
    *New: Calibration: Blank is now ignored for the construction of the calibration curve when Origin is set to "Curve passes through Origin" or "Compute with Origin". This can result in different…
  4. 10.1.0 (Version history)
    *New: Control: First Release - Axcend FocusArray control module is now available. *New: Control: First Release - Coruitech modules (Corui Module SamplerU and Corui Module ColumnOven) are now available through external installer. *New: Control: First Release - Ecom ECLM2000 control module is now available. *New: Control: First Release - Ecom FRC ECVA2000 control...
    *New: Control: First Release - Axcend FocusArray control module is now available.*New: Control: First Release - Coruitech modules (Corui Module SamplerU and Corui Module ColumnOven) are now available…
  5. 10.1.1 (Version history)
    *New: Control: First Release - Spark SP240 and SP870 are now available. *New: Control: First Release - Young In Chromass ChroZen 2310 is now available. *New: Control: First Release - Zhengzhou Annuo AS-3016 module is now available. *New: Control: Update - Agilent ICF control module has been updated to version A.03.04.U1. *New: Control: Update...
    *New: Control: First Release - Spark SP240 and SP870 are now available.*New: Control: First Release - Young In Chromass ChroZen 2310 is now available.*New: Control: First Release - Zhengzhou Annuo AS…
  6. 10.1.2 (Version history)
    *New: Control: First Release - Ecom FCDetector control module is now available. *New: Control: First Release - Ecom MODBUS control module is now available. *New: Control: First Release - Flom U-32 control module is now available. *New: Control: First Release - HTA RC.net control modules for 3x00A and 2800T for liquid mode, 2x00H...
    *New: Control: First Release - Ecom FCDetector control module is now available.*New: Control: First Release - Ecom MODBUS control module is now available.*New: Control: First Release - Flom U-32…
  7. 1.4.11.055 (Version history)
    ----------------- CHANGES ------------------ * Command Export renamed to Export Legacy ----------------- FIXED BUGS --------------- # Fixed Bug: Non functional selection of name and directory in command Import Data # Fixed Bug: A posibility to set Scale=0 in Chromatogram window # Fixed Bug: Wrong setting Dilution=0...
    ----------------- CHANGES ------------------ * Command Export renamed to Export Legacy ----------------- FIXED BUGS --------------- # Fixed Bug: Non functional selection of name and directory in…
  8. 1.4.11.056 (Version history)
    ----------------- FIXED BUGS --------------- # Fixed Bug: Improper detection of input range of Import data in text format # Fixed Bug: Direct control of AS in...
    ----------------- FIXED BUGS --------------- # Fixed Bug: Improper detection of input range of Import data in text format # Fixed Bug: Direct control of AS in sequence
  9. 1.4.11.060 (Version history)
    ----------------- CHANGES ------------------ * Beta version of the control module for HTA AS300 sampler * The possibility to enter zero as a vial position in the sequence ----------------- FIXED BUGS --------------- # Fixed Bug: Chromatograms printed from Channel window don´t follow Chromatogram window setting #...
    ----------------- CHANGES ------------------ * Beta version of the control module for HTA AS300 sampler * The possibility to enter zero as a vial position in the sequence ----------------- FIXED…
  10. 1.4.11.066 (Version history)
    ----------------- CHANGES ------------------ * Command “Legacy Export” renamed to “Export Data” * Set of commands “Export Data in …” renamed to “Export Chromatogram in …” ----------------- FIXED BUGS --------------- # Fixed Bug: In case of very small values the calibration curve and its equation were not displayed correctly...
    ----------------- CHANGES ------------------ * Command “Legacy Export” renamed to “Export Data” * Set of commands “Export Data in …” renamed to “Export Chromatogram in …” ----------------- FIXED…