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GUIDES & DOCUMENTATION

  1. The MS Chromatogram window is used on GC-MS-MS and LC-MS-MS instruments instead of the standard Chromatogram window. It offers similar functionality but includes specific features related to tandem…
  2. After installation, new functions of the MS Extension will be available. Only features changed or added to the Clarity standard mode are listed and described here.
  3. The Integration tab shows Integration Table for detectors' signals, and is the same as in standard Clarity. This table is for integration of standard signals coming from detectors, serving as Result…
  4. The Integration tab shows Integration Table for detectors' signals, and is the same as in standard Clarity. This table is for integration of standard signals coming from detectors, serving as Result…
  5. The Clarity MS Extension is an optional part of the Clarity Chromatography Station. It is intended for data acquisition and evaluation of data measured on MS Detectors. MS Extension is also…
  6. MS Menu Menu containing all commands available in the MS Extension. Icon Command Description   MS Integration Switches the display of the lower part of the MS Chromatogram window…
  7. MS Menu Menu containing all commands available in the MS-MS Extension. Icon Command Description   MS Integration: MS-MS Switches the display of the lower part of the MS…
  8. MS Method tab in the MS Chromatogram window is used to set up the method parameters. MS Method tab Common for All Peaks Items in this section are common properties of all peaks defined in the MS…
  9. MS Method MS Method tab in the MS Chromatogram window is used to set up the method parameters. MS Method tab Common for All Peaks Items in this section are common properties of all peaks defined…
  10. MS Search dialog is used to set the parameters for search in spectral libraries. The search is performed by NIST MS Search program mechanism on libraries linked to Clarity - either NIST DEMO17…
  11. MS Search dialog is used to set the parameters for search in spectral libraries. The search is performed by NIST MS Search program mechanism on libraries linked to Clarity - either NIST DEMO17…
  12. After installation, new functions of the MS-MS Extension will be available. Only features changed or added to the Clarity standard mode are listed and described here.
  13. The Clarity MS-MS Extension is an optional part of the Clarity Chromatography Station since version 10.0. It is intended for data acquisition and evaluation of data measured on MS-MS Detectors. MS-…
  14. The standard to be used will have a table detailing the % Cumulative Weight Fraction (Percent [%] in Clarity) and Molecular Weight (M) values supplied by the manufacturer of the standard. Multiple…
  15. This method utilizes Broad Standards with solely known Mn and Mw values. The Hamielec method assumes that the calibration can be approximated by straight line in the area of Broad Peak being…
  16. Multiple Clarity in a network The simplest setup of Clarity in Network includes at least one Clarity, one Clarity Offline, and a shared network disk, which can either be located on the same PC or…
  17. When one or more users need to work on multiple computers, the user accounts (including passwords) must be identical on all Clarity stations. This can be achieved by copying the CLARITY.PSW file to…
  18. The MW Distribution tab in the Graph pane of the Chromatogram window shows the molecular weight distribution of the active peaks from the (possibly overlaid) signals or chromatograms. In signals…
  19. Narrow calibration can be used if narrow molecular weight distribution standards (polydispersity < 1.2) are available for given polymer. Calibration curve is constructed from detected peak…
  20. This chapter explains a few most common issues you may encounter while learning how to use Clarity. For a more comprehensive list of potential issues and their solutions, please refer to the…
  21. NGA Amounts The NGA Amounts table contains some of the columns from the standard Result Table, but it also contains additional columns specific for the NGA Extension. Chromatogram…
  22. This chapter lists and describes the features changed in or added into Clarity by the NGA Extension.
  23. The NGA Extension is an optional add-on for the Clarity Chromatography Software. It can expand any Clarity Instrument as well as Clarity Offline. The Clarity NGA Extension is a tool for natural gas…
  24. NGA Results In the NGA Results tab, you can find the table containing results of calculations for the selected norm. Results are automatically recalculated each time you open or change the…
  25. In this pane, you can set up the NGA Method - choose a norm and edit its parameters. Chromatogram window - NGA Results - NGA Settings NGA Method ① Displays the currently opened NGA Method. All…
  26. NGA Summary Displays the NGA results for all chromatograms opened in the Overlay Mode (for more details see also chapter NGA Results). Chromatogram window - NGA Summary NGA Summary Table In…
  27. The NGA tab is divided into two panes: Left pane: includes the NGA Results and NGA Amounts subtabs. Right Pane: includes the NGA Settings.
  28. A message “No data from acquisition for 10 sec” or “No Data received for 10 sec” appears during data acquisition. It indicates that no data were received from a detector or A/D converter (e.g.…
  29. Noise & Drift The Noise (all variants) and Drift parameters are set as intervals. All values can be utilized in custom calculations in User Columns. All interval operation follows the rule that…
  30. This topic describes how to use Clarity, in order to obtain correct results calculated according to normalization calibration method. The normalization can be achieved by two means. First option is…
  31. For Normalized Area % calculation no specific settings are necessary, the calculation results are always present in the Area% column in the Result table.
  32. To find out information on the supported control modules and Extensions, used A/D converters and purchased Instrument licenses follow this procedure: Open the About box: Select Help - About… on the…
  33. Batch opening and processing of chromatograms can be used for “ex-post” validation that works similarly to simple opening of chromatograms in the Chromatogram window with the Overlay mode enabled.…
  34. Manual validation can be performed on already measured chromatograms with the advantage that these chromatograms may be measured in various sequences. Manual validation is used for the ex-post…
  35. During an online validation, the measured chromatograms will be gradually and automatically opened in the Chromatogram window. Validation results will automatically be updated with every new…
  36. Open Audit Trail (Append) When invoked, displays the selection of all previously saved Daily Audit Trail files. Newly opened files will be displayed together within the current Daily Audit Trail…
  37. Opens the Open Chromatogram dialog, where you can select chromatogram(s) to be opened and display their information. You can use shortcut Ctrl + O to access this dialog.   Note: You…
  38. The Open Chromatogram dialog indicates in the Information Pane whether the selected chromatogram contains PDA data. The item that does so is labeled as Has PDA Data. Open Chromatogram
  39. Opens chromatograms measured in one sequence. Using the command invokes the Open dialog. In the dialog, select the sequence file, and typically all chromatograms measured in this sequence will be…
  40. Open Dialog (Sequence, Chromatogram, Calibration, Method) This is a universal dialog for selecting files. As it differs somewhat in appearance from the standard window for file selection of the…
  41. There is a project containing DEMO data for MS Extension prepared in the software. It contains a set of chromatograms, prepared matching calibration and sample MS method. To open the DEMO_MS project…
  42. There is a project containing DEMO data for MS-MS Extension available on request to DataApex Ltd. - please let us know on support@dataapex.com . It contains a prepared chromatogram, matching…
  43. In the Chromatogram window, click the Open Chromatogram icon . Choose a chromatogram that has PDA data. The presence of PDA data is noted in the chromatogram details at the bottom part of the dialog…
  44. There is a project containing DEMO data for the PDA Extension demonstration available in the software. It contains a set of chromatograms, prepared matching calibrations, and a sample PDA method. To…
  45. DataApex Validator 2 and OQ Validation Wizard The Operational Qualification (OQ) is a procedure designed to confirm that the data station is performing according to the manufacturer’s…
  46. Tabs: Commands - Toolbars - Menu - Options Options tab displays options for toolbars. Customize - Options When Show Screen Tips on toolbars checkbox is checked, help in the form of a tooltip…
  47. In case you obtained Clarity Demo installation, you may follow chapters in the Demo Guide. It provides you overview of Clarity Chromatography Station and using the prepared Demo data you can try all…
  48. others.ini file The others.ini file located in the Clarity installation directory (C:\CLARITY\Cfg by default). It contains keys for in-depth tuning of the Clarity Chromatography Station. The file in…
  49. The user can work with multiple chromatograms in the OVERLAY mode. The activation of this mode is indicated by an activated icon next to the Overlay Mode command in the File menu, an activated icon…
  50. Overlay & Other Includes commands for working with several chromatograms simultaneously. The maximum number of displayed chromatograms is practically unlimited, the actual limit can be set in…