Importing MS Chromatogram

  • Open the Chromatogram window on the Instrument where MS Extension is active.
  • Use the File – Import Chromatogram… command to get the import selection. Select a file and press the Open button.

Note:

Clarity currently supports *.cdf, *.mzData, *.mzXML and *.mzML files for the import, proprietary formats can be converted using the ProteoWizard MSConvert (http://proteowizard.sourceforge.net) software.

  • The MS Import AIA File or Import MS Data File dialog will open (based on the format to import from).
  • You can check particular import parameters, and select up to four m/z Signals to be automatically extracted from the imported file. The TIC and BPI signals will be created from the imported data automatically. Also, you may manually enter the m/z Step and Frequency of the detector, or let Clarity count the parameter from the imported data.
  • Press the OK button to import the file.